PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0026s0109.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 333aa MW: 37231 Da PI: 6.8509 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.9 | 1e-26 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien +nrqvtfskRrng++KKA+ELS+LCd+++a+i+fs++++l +s Kaladp0026s0109.1.p 9 KRIENITNRQVTFSKRRNGLIKKAYELSILCDVDIALIMFSPSQRLSHFS 58 79********************************************9997 PP | |||||||
2 | K-box | 15.1 | 9.6e-07 | 117 | 177 | 9 | 69 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 +++ e+lqqel+ L+ + + q+++R + + L+ s+ eL+ e++L + +++i +K Kaladp0026s0109.1.p 117 SVNSNVEELQQELSSLQHQFQIAQEKLRIYEPNPLDFSSMAELEACEKNLMDIMSNISVRK 177 457789*********************************************9999999888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MGRVKLQIKR IENITNRQVT FSKRRNGLIK KAYELSILCD VDIALIMFSP SQRLSHFSGK 60 RRIEDVLTRY INLPDHDRGG DRIASKKCRI VLNNEYLITT LQTLRAVALQ LANQGRSVNS 120 NVEELQQELS SLQHQFQIAQ EKLRIYEPNP LDFSSMAELE ACEKNLMDIM SNISVRKLYL 180 DEQNGVPVSP TSFENKVISW MPGNGSNPNL IFVGSDPSTG SISIRNHSSF TIYDPMLQGS 240 GITTDHESMN GCHITNSTYE QIPPWHQSYT SAELLSVFMP PTSFSQIKEM GGPSMQSMMT 300 SQQGEATSSC QHQQAPSAGE SLSATYDHHQ AQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22130.1 | 6e-80 | MIKC_MADS family protein |