PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0024s0460.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 356aa MW: 39925.9 Da PI: 6.2713 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.8 | 5.8e-28 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtfskRrng++KKA+ELS+LCd+++a+i+fs++g+l +s Kaladp0024s0460.1.p 9 KRIENNTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFS 58 79********************************************9997 PP | |||||||
2 | K-box | 17.3 | 2e-07 | 110 | 175 | 9 | 74 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnelll 74 + +++ e+lqqel L+ +++ q+++R + + L+ s+ eL+ e+++ + ++ i ++K++l+ Kaladp0024s0460.1.p 110 AVNSNVEELQQELISLQHQLKIAQEKLRIYEPNPLDFSSMAELEACEKNILDIMSDISERKKQLMN 175 567899**********************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 356 aa Download sequence |
MGRVKLQIKR IENNTNRQVT FSKRRNGLIK KAYELSILCD IDIALIMFSP SGRLSHFSGK 60 RRIEDVLTRY INLPDRDRGG ISLNTEYLIT TLKTLRAEND VALQLANPGA VNSNVEELQQ 120 ELISLQHQLK IAQEKLRIYE PNPLDFSSMA ELEACEKNIL DIMSDISERK KQLMNVRNQH 180 CSNFDPSSYM QMYLDGQDGV PVSTTFDNEV INWLPKNESN SNPIFVGSDP SASSISMRNH 240 TSSTIYDPMS HGSEIAMDHK NMSVCHITNS TFEQMSPWHQ SYTSAELLTA FMSPSAFPQI 300 KEIGGPSMQP MMTGQQGEAT SSCQHHQATS AGENESATYD HHQPAQLPRH PIHGE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22130.1 | 2e-92 | MIKC_MADS family protein |