PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0020s0186.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 444aa MW: 48583.6 Da PI: 6.6815

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0020s0186.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.7	4.2e-13	312	358	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Kaladp0020s0186.1.p 312 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAISYITDLQ 358 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MGDKFWVSDE ERAAVEAVVG AEACQFLISP GSESGFSELA ISSSRGDSSA RHALSRLVAG 60 DSDWNYSILW RGSRTRGNGS ALVWGEGHCG GAVAGNPSLS EDEKLRRERV VRLIQKRFGK 120 SFDQRCLVSN LEMFYLVSMC YSFSSGSVYG PVQVYEHGRA VWAVENCAAQ YESRWHLAKL 180 AGLKTVAFVP VKAGVVEIGS VASIPEEKKV LRMIEGLFGS SDLVQSKIFG EDLSLSASNS 240 RSMSISFSPK VEEELGLGSE EGGIGVSHFY GSSVNGRAGS LGFEQFKDEE GDDRKPRKRG 300 RKPANGREQA LNHVEAERQR REKLNQRFYA LRAVVPNISK MDKASLLGDA ISYITDLQSK 360 IRILENEKDA PNVDKQSVAE FEFQERQDDA IVRVGYPLDA HPVSGLCDVS ITDNGKVVHT 420 FSIRNHGAPA EHVKEKLLDA LSK*

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MGDKFWVSDE ERAAVEAVVG AEACQFLISP GSESGFSELA ISSSRGDSSA RHALSRLVAG  60
DSDWNYSILW RGSRTRGNGS ALVWGEGHCG GAVAGNPSLS EDEKLRRERV VRLIQKRFGK  120
SFDQRCLVSN LEMFYLVSMC YSFSSGSVYG PVQVYEHGRA VWAVENCAAQ YESRWHLAKL  180
AGLKTVAFVP VKAGVVEIGS VASIPEEKKV LRMIEGLFGS SDLVQSKIFG EDLSLSASNS  240
RSMSISFSPK VEEELGLGSE EGGIGVSHFY GSSVNGRAGS LGFEQFKDEE GDDRKPRKRG  300
RKPANGREQA LNHVEAERQR REKLNQRFYA LRAVVPNISK MDKASLLGDA ISYITDLQSK  360
IRILENEKDA PNVDKQSVAE FEFQERQDDA IVRVGYPLDA HPVSGLCDVS ITDNGKVVHT  420
FSIRNHGAPA EHVKEKLLDA LSK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	294	302	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	2e-99	bHLH family protein