PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0018s0081.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 267aa MW: 29217.4 Da PI: 6.5178 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.5 | 1.9e-19 | 121 | 170 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 gy+GVr+++ +g+W+AeIrdp + r++lg+f ae+Aa+a+++a+ k++g Kaladp0018s0081.1.p 121 GYRGVRQRP-WGKWAAEIRDP-----HraVRVWLGTFNNAEDAARAYDRAAFKFRG 170 8********.**********7.....338*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
METSFTAGQS PSFRLTSDQE VAAMVAALTT VVTGGGSHQP LPHAATTSYS HDSESASSVW 60 SIESESDTCR FCQLRDCLGC NLFAPNLEAR EPLKGGKNRA AAATGARKMK KRSDQSGMMR 120 GYRGVRQRPW GKWAAEIRDP HRAVRVWLGT FNNAEDAARA YDRAAFKFRG PRAKLNFPFE 180 DYSSAAEQSS PDSAPEAYQC EPSDRTTDQS LDFDSAGGFG APGMWDFRGN DEVMRQWMMS 240 METGTAATSF IRKYLVGLDL VNETGF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 4e-30 | ERF family protein |