PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0017s0022.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 258aa MW: 30334.4 Da PI: 7.8216 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.9 | 1.5e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nr+vtfskRr+g+ KKA+E+SvLCdaeva+iifs +gkl+eys+ Kaladp0017s0022.1.p 9 KRIENKINRKVTFSKRRTGLVKKAHEISVLCDAEVALIIFSGDGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 92.9 | 5.3e-31 | 82 | 180 | 2 | 100 |
K-box 2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 q+ ++l+++ +e + e++kLk+++e Lqr++Rh+lGed+++Ls+ eLq+Le+qL+ slk+iR++Kn+l++e+i+elqkke+ +qe+n Kaladp0017s0022.1.p 82 QQMGASDLQQNPQEIKSMEYNKLKSRLELLQRNHRHYLGEDVDTLSMGELQNLEHQLHASLKRIRERKNHLMHESISELQKKERVMQEQN 171 55555668888888999************************************************************************* PP K-box 92 kaLrkklee 100 ++L++k +e Kaladp0017s0022.1.p 172 NMLTRKEKE 180 *****9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MGRRRVELKR IENKINRKVT FSKRRTGLVK KAHEISVLCD AEVALIIFSG DGKLFEYSTD 60 SCMEKILERY ERYSYAERQH YQQMGASDLQ QNPQEIKSME YNKLKSRLEL LQRNHRHYLG 120 EDVDTLSMGE LQNLEHQLHA SLKRIRERKN HLMHESISEL QKKERVMQEQ NNMLTRKEKE 180 MEKTLMVRQE EVHQWEHQHQ HNHGTASSSS FHLGQPVPCL NTGHTTYQVE ADGMMSQNEL 240 ELTLEPVYSY HLGLFAA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 4e-95 | MIKC_MADS family protein |