PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0016s0160.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

LBD

Protein Properties

Length: 288aa MW: 29389.8 Da PI: 7.5885

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0016s0160.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127.5	6.4e-40	34	134	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+k+l+++p +r da+ +++yeA+ar+r+PvyG+v++i++lqqq+ + Kaladp0016s0160.1.p 34 PCGACKFLRRKCVEGCIFAPYFDSEQgSAHFAAVHKVFGASNVSKMLQHVPLPKRLDAVVTICYEAQARLRNPVYGCVAHIFALQQQVVN 123 7*********************9989********************************************************** PP DUF260 90 lkaelallkee 100 l+ e+++l+++ Kaladp0016s0160.1.p 124 LQGEISYLQAH 134 ****99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MSSNPTIGCA PGGSSSGGGG GGGAGGGGGG GGGPCGACKF LRRKCVEGCI FAPYFDSEQG 60 SAHFAAVHKV FGASNVSKML QHVPLPKRLD AVVTICYEAQ ARLRNPVYGC VAHIFALQQQ 120 VVNLQGEISY LQAHLANLEL QTPPVQPPAP PPHNPLPHFS ISDLPTASAM PPTFDVSSLL 180 FDPVTQWPQL QPMHPQHHQQ ASDLNNPNTR DQYVTLAIPH PSSDGAQNLA PGGAAGTSGS 240 GGGDAQGLAR ELLLRHGSSY RASGASSSGA VHGSCSEAQR PSGGQPK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00220.1	4e-63	LBD family protein