PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0016s0148.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 228aa MW: 25914.4 Da PI: 8.6273 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.9 | 3.5e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s Kaladp0016s0148.1.p 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 83.1 | 6.2e-28 | 76 | 170 | 3 | 97 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenk 92 ++s++++ e++ +l++e+a++ k+ie L+ +R+llGedL+ ++l+eLq+Leqq+e+s++++R +K+e+++eqie+l++kek+l en Kaladp0016s0148.1.p 76 SQSKEKVPEEDILHLKTEAANMTKRIELLEAAKRKLLGEDLGACTLEELQKLEQQMERSVTRVRGRKTEVFKEQIERLKEKEKALAAENA 165 4555669999******************************************************************************** PP K-box 93 aLrkk 97 L +k Kaladp0016s0148.1.p 166 ILLEK 170 99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS 60 SMQETIQRYQ RQTKDSQSKE KVPEEDILHL KTEAANMTKR IELLEAAKRK LLGEDLGACT 120 LEELQKLEQQ MERSVTRVRG RKTEVFKEQI ERLKEKEKAL AAENAILLEK CGLLSNPRRS 180 NESDEPTRGE AQPADNTEDS QISDVETELF IGPPEQRTKR CSINGSN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 4e-75 | MIKC_MADS family protein |