PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0012s0014.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 453aa MW: 49411.8 Da PI: 8.3568

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0012s0014.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.7	4.4e-13	305	351	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Kaladp0012s0014.1.p 305 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAISYITDLQ 351 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MGDKFRVSDE ERAAVEAVVG AGASHFLTSS ASETGFRDLA ASSNCVDSSV HHALSRLVAG 60 DSDWNYLVFW RASRSKGNGS ALVWGDGHCG GANAQNPSLS EEEKLRREKV VRLIQKWFGK 120 SVNKNGLLSN LELFYLVSMC YSFSSESASG PGQVYKYSRA VWAVDKCQEQ YESRAHLAKL 180 AGLKTVVFVP VKEGVVEIGS VAAVAEEKKV LQMIEGLFGC PESVLPKIFG QDLSLGGSNS 240 RSMRISFSPK VEEGGGIGVS QFYGSTVSGQ GGGLGFEQFR DEEGDDRKPR KRGRKPANGR 300 EQPLNHVEAE RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAISYITDL QSKIRMLETE 360 KDAPKAQAQA VPEFEFQARQ DDAIVRVSHP LDAHPVSRVI KALRENQMTP GPEMCDVSIT 420 NNDMVVHTFS IRTQGGAAAE HVKEKLLAAL SK*

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MGDKFRVSDE ERAAVEAVVG AGASHFLTSS ASETGFRDLA ASSNCVDSSV HHALSRLVAG  60
DSDWNYLVFW RASRSKGNGS ALVWGDGHCG GANAQNPSLS EEEKLRREKV VRLIQKWFGK  120
SVNKNGLLSN LELFYLVSMC YSFSSESASG PGQVYKYSRA VWAVDKCQEQ YESRAHLAKL  180
AGLKTVVFVP VKEGVVEIGS VAAVAEEKKV LQMIEGLFGC PESVLPKIFG QDLSLGGSNS  240
RSMRISFSPK VEEGGGIGVS QFYGSTVSGQ GGGLGFEQFR DEEGDDRKPR KRGRKPANGR  300
EQPLNHVEAE RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAISYITDL QSKIRMLETE  360
KDAPKAQAQA VPEFEFQARQ DDAIVRVSHP LDAHPVSRVI KALRENQMTP GPEMCDVSIT  420
NNDMVVHTFS IRTQGGAAAE HVKEKLLAAL SK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	287	295	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-107	bHLH family protein