PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0003s0067.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 962aa    MW: 105789 Da    PI: 6.0326
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0003s0067.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3811.2e-25147248199
                          EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                          f+k+lt sd++++g +++p++ ae+        ++++ + ++l+++d++ ++W++++iyr++++r++lt+GW+ Fv+a++L++gD+v+F 
  Kaladp0003s0067.1.p 147 FCKTLTASDTSTHGGFSVPRRAAEKLfpildytMQPP-T-QELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVSAKRLRQGDSVLFI 234
                          99*********************999*****954444.4.38************************************************ PP

                          E-SSSEE..EEEEE-S CS
                   B3  84 ldgrsefelvvkvfrk 99 
                            ++++ +l+v+++r+
  Kaladp0003s0067.1.p 235 --RDEKSQLMVGIRRA 248
                          ..4577778*****97 PP
2Auxin_resp108.95.5e-36273356183
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                          aahaa+++s+F+++YnPr+++s+Fv+++ k++ka+  +++s+GmRf m+fete+s +rr++Gt+v vsdldpvrWp+SkWr+++
  Kaladp0003s0067.1.p 273 AAHAAANRSPFTIFYNPRQCPSDFVIPMPKFRKAVFgTQISMGMRFGMMFETEESGKRRYMGTIVNVSDLDPVRWPGSKWRNVQ 356
                          79********************************988********************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 962 aa     Download sequence    
MGSVVEEKMK PGGLPNGVST NLLEEMKMVK ELQDQSGAAK TMNSELWHAC AGPLVSLPQI  60
GGLVYYFPQG HSEQVAVSTR RSATSQIPNY PNLPSQLLCQ VHNVTLHADK ETDEIYAQMS  120
LQPVNTEKDI IPVQEFGQPS KHPSEFFCKT LTASDTSTHG GFSVPRRAAE KLFPILDYTM  180
QPPTQELVVR DLHDNTWTFR HIYRGQPKRH LLTTGWSLFV SAKRLRQGDS VLFIRDEKSQ  240
LMVGIRRANR QQTTLPSSVL SADSMHIGVL AAAAHAAANR SPFTIFYNPR QCPSDFVIPM  300
PKFRKAVFGT QISMGMRFGM MFETEESGKR RYMGTIVNVS DLDPVRWPGS KWRNVQVEWD  360
EAGCSDKPNR VSSWDIETPE SLFIFPSLTS GYKRPLTAPT GFLGAETDWR SLIKRPFVRM  420
PDNGFGNLHP MASPCSEQLM KMLMKSHMVN HPTNFSSMPA DSSYNRAPVQ DVRAMEAVTK  480
QITNQLTSSG NTLAQIQNSS QSQPCPSQSA TPANSKALLQ ATHQEKALQG VKSELTSSEP  540
VTQDHGNRLK SASQIVENPA PSSMNPPVSM SSPTSLNQQM TINQLTSLSP SHGQFQPVNP  600
WQSHQPMDSS IFQSQPTEAP QSDLSTINSL LPYLETDEWI LNTSSSYQQL PGVFRSPASL  660
PMYGYQDSAP TVFPEVVNPA MSSMGHDVSE HQLNSIQSVS QSDRLVPLPL QGPGNVNLSG  720
FKELSSDINP NYSCLNYDGC NTTTAVVDHS VPSTFLDGFC KMDDPAFQNA SDCLVGAVSS  780
SQDMQSQITS ASLADSHAFS RQDFTDNSGG TSSSNVEFDD SSLLQTNSWQ QVAPPLRTYT  840
KVQKTGSVGR SIDVTSFRNY EELRSAIERM FGLEGLLKDS RGSAWKLVYV DYEKDVLLVG  900
DDPWEEFVGC VRCIRILSPT EVQQMSEEGM KLLNSTAAAA AMHGLNRALA EGGSSAWDTL  960
A*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein