PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0003s0054.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 237aa MW: 27235 Da PI: 9.8521 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.6 | 7.9e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvt+skRrng++KKAeEL vLCda+v+vi++sst+k++ey+s Kaladp0003s0054.1.p 9 KRIENTTNRQVTYSKRRNGLFKKAEELTVLCDAKVSVIMISSTQKIHEYIS 59 79***********************************************86 PP | |||||||
2 | K-box | 90.7 | 2.7e-30 | 71 | 168 | 1 | 98 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 yqk+s+++++++++e++q+ l+k+k++++ L++e+R+++Ge+L++Ls++eL+ Leq+++++ + iR++K++ + + +++l+kk ++++e+ Kaladp0003s0054.1.p 71 YQKASNTDVWSKQYERMQETLRKVKEKNKRLRTEIRQRMGECLNDLSFEELRGLEQDMDNAATAIRARKYKAIGSRTDTLRKKVRNVEEI 160 8999************************************************************************************** PP K-box 91 nkaLrkkl 98 ++L+++l Kaladp0003s0054.1.p 161 YRKLNQEL 168 ****9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MARGKIQIKR IENTTNRQVT YSKRRNGLFK KAEELTVLCD AKVSVIMISS TQKIHEYISP 60 GITTKQVVDL YQKASNTDVW SKQYERMQET LRKVKEKNKR LRTEIRQRMG ECLNDLSFEE 120 LRGLEQDMDN AATAIRARKY KAIGSRTDTL RKKVRNVEEI YRKLNQELVC PQSNFEFARE 180 AREEDRHYGL VDNSGDYESV IALGPRVFAL HLNPNQSANM QSCGGSDLTY TLMSGN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 9e-86 | MIKC_MADS family protein |