PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021301202.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 354aa MW: 37189.9 Da PI: 5.0162

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021301202.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	73.4	3.3e-23	255	317	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L +eN+ L++el++l++e++kl+se+ XP_021301202.1 255 ERELKRQKRKQSNRESARRSRLRKQAECEELQARVESLANENRNLREELKKLSDECEKLTSEN 317 89***********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MGTEEESTPA KPSKPTASTQ EIPTTPLYPD WSSSMQAYYG AGATPPPFFA STVASPTPHP 60 YIWGDQHPLM PPYGTPVPYP AIYPPGGVYA HPNMATVSNS AQNNVDHEVK GTDGKDRGAT 120 KKSKGTSGSK VGESGKVASG SGNDGGSQSG ESGSEGTSDG SDENNQQELA AGKKGSFDQM 180 LADANAQSNT AGAVQALVPG KPIVSMPATT LNIGMDLWSG SPAAAGAAKM RPNSSGAVAT 240 VAPGGVMPDP WIQDERELKR QKRKQSNRES ARRSRLRKQA ECEELQARVE SLANENRNLR 300 EELKKLSDEC EKLTSENSSI KDELTRMCGP DALTDLEQDN PAAALQSRGG EGNS

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MGTEEESTPA KPSKPTASTQ EIPTTPLYPD WSSSMQAYYG AGATPPPFFA STVASPTPHP  60
YIWGDQHPLM PPYGTPVPYP AIYPPGGVYA HPNMATVSNS AQNNVDHEVK GTDGKDRGAT  120
KKSKGTSGSK VGESGKVASG SGNDGGSQSG ESGSEGTSDG SDENNQQELA AGKKGSFDQM  180
LADANAQSNT AGAVQALVPG KPIVSMPATT LNIGMDLWSG SPAAAGAAKM RPNSSGAVAT  240
VAPGGVMPDP WIQDERELKR QKRKQSNRES ARRSRLRKQA ECEELQARVE SLANENRNLR  300
EELKKLSDEC EKLTSENSSI KDELTRMCGP DALTDLEQDN PAAALQSRGG EGNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	272	278	RRSRLRK
2	272	279	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	1e-105	bZIP family protein