PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021296282.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 248aa MW: 28489.3 Da PI: 9.7994 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.6 | 9.1e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+ rqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+ XP_021296282.1 10 RIENKISRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSNKGKLFEYST 59 8***********************************************96 PP | |||||||
2 | K-box | 94.7 | 1.5e-31 | 83 | 174 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ++ + ++ e+ kL + ie Lqr++Rh+lGe+L++Lsl++Lq Leqq+++slk+iR++Kn+l++e+i+elqkke+ lq +n++L kkl+e XP_021296282.1 83 TGSESQGNWPLESPKLMSTIEALQRNLRHFLGEELDPLSLRDLQLLEQQIDTSLKRIRTRKNQLMHESISELQKKERTLQTQNNMLAKKLKE 174 56677899*********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MGRGRVQLRR IENKISRQVT FSKRRTGLLK KAHEISVLCD AEVALIVFSN KGKLFEYSTD 60 SSMERILDRY EQQSHAERQL VPTGSESQGN WPLESPKLMS TIEALQRNLR HFLGEELDPL 120 SLRDLQLLEQ QIDTSLKRIR TRKNQLMHES ISELQKKERT LQTQNNMLAK KLKENEKTQT 180 EHAQCEQQNL SQNSSSFIQP PPATIEFPSL TIGGSFQAIE SANKEAETQA QPSTNTVIPP 240 WMLRHVNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 2e-79 | MIKC_MADS family protein |