PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021295177.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB_related | ||||||||
Protein Properties | Length: 81aa MW: 9547.52 Da PI: 9.214 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.5 | 8.7e-10 | 28 | 69 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++E+ l+ + +++ G + W++Ia +++ gRt+ ++ +w XP_021295177.1 28 VEFSEDEEMLITRMFNLVGDR-WSLIAGRIP-GRTADEIEKYWT 69 679****************99.*********.***********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 81 aa Download sequence |
MGDLDRSSRS RGRRQDTKEV RTDQDAKVEF SEDEEMLITR MFNLVGDRWS LIAGRIPGRT 60 ADEIEKYWTS RRSSQSTHNQ R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46410.1 | 1e-18 | MYB_related family protein |