PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021294335.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 351aa MW: 38742.4 Da PI: 9.7004 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 173.8 | 4.9e-54 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+k+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+++++ XP_021294335.1 15 LPPGFRFHPTDEELVVHYLKRKAASAPLPV-TIIAEVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIITS 108 79****************************.89***************8888999************************************9998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg kt+W+mheyrl XP_021294335.1 109 nGNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142 67788***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 351 aa Download sequence |
MESTDSSSAS PHPQLPPGFR FHPTDEELVV HYLKRKAASA PLPVTIIAEV DLYKFDPWEL 60 PSKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPIITSNG NQKVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RLVDNNSTSK PQIADVANRK GSLRLDDWVL CRIYKKNNTQ 180 RPMERDKDYS TVGMLATLPT STHHNPKPPT SKATGYGSLL ENEANFFEGI LTGEGMQHSS 240 ISQIPAASSS SKQDLSMSLA STTTNAFPVK RTVPPQYWNE PNSSFGSQAG KRFQGDLNSS 300 STAGIDDTNS FVSLLNQLPQ NAPFYPGTLV GSFGDGVSRQ QFILPSVNWN S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G15510.1 | 1e-108 | NAC family protein |