PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021294334.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 359aa MW: 39606.4 Da PI: 9.5972

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021294334.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.5	1.1e-52	15	150	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lppGfrFhPtdeelvv+yLk+k+++ +l++ ++i+evd+yk++Pw+Lp k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg XP_021294334.1 15 LPPGFRFHPTDEELVVHYLKRKAASAPLPV-TIIAEVDLYKFDPWELPIfglcnfvgKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATG 108 79**************************.89***********5589998876666999*************************** PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +dk+++++ ++++vg+kk Lvfy g+ pkg kt+W+mheyrl XP_021294334.1 109 TDKPIITSnGNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 150 999867788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MESTDSSSAS PHPQLPPGFR FHPTDEELVV HYLKRKAASA PLPVTIIAEV DLYKFDPWEL 60 PIFGLCNFVG KATFGEQEWY FFSPRDRKYP NGARPNRAAT SGYWKATGTD KPIITSNGNQ 120 KVGVKKALVF YGGKPPKGIK TNWIMHEYRL VDNNSTSKPQ IADVANRKGS LRLDDWVLCR 180 IYKKNNTQRP MERDKDYSTV GMLATLPTST HHNPKPPTSK ATGYGSLLEN EANFFEGILT 240 GEGMQHSSIS QIPAASSSSK QDLSMSLAST TTNAFPVKRT VPPQYWNEPN SSFGSQAGKR 300 FQGDLNSSST AGIDDTNSFV SLLNQLPQNA PFYPGTLVGS FGDGVSRQQF ILPSVNWNS

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MESTDSSSAS PHPQLPPGFR FHPTDEELVV HYLKRKAASA PLPVTIIAEV DLYKFDPWEL  60
PIFGLCNFVG KATFGEQEWY FFSPRDRKYP NGARPNRAAT SGYWKATGTD KPIITSNGNQ  120
KVGVKKALVF YGGKPPKGIK TNWIMHEYRL VDNNSTSKPQ IADVANRKGS LRLDDWVLCR  180
IYKKNNTQRP MERDKDYSTV GMLATLPTST HHNPKPPTSK ATGYGSLLEN EANFFEGILT  240
GEGMQHSSIS QIPAASSSSK QDLSMSLAST TTNAFPVKRT VPPQYWNEPN SSFGSQAGKR  300
FQGDLNSSST AGIDDTNSFV SLLNQLPQNA PFYPGTLVGS FGDGVSRQQF ILPSVNWNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-105	NAC family protein