PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294297.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 312aa    MW: 35273.6 Da    PI: 7.9646
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.22e-5081361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+ +yLk+k++ ++++   +i++v+iyk++Pw+Lp k+  +e+ew+fFs+rdkky++g+r+nr+++sgyWkatg+dk+++s+
  XP_021294297.1   8 LPPGFRFHPTDEELIIHYLKQKASPSSNPPILIIADVNIYKFNPWELPDKAFLGENEWFFFSPRDKKYPNGTRPNRTAASGYWKATGTDKPIISS 102
                     79**********************999777678***************7777899**************************************99 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++  g+kk Lvfykgr pkg+ktdW+m ey l
  XP_021294297.1 103 vGSQCLGMKKALVFYKGRPPKGVKTDWMMTEYML 136
                     78888***************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MNRPSASLPP GFRFHPTDEE LIIHYLKQKA SPSSNPPILI IADVNIYKFN PWELPDKAFL  60
GENEWFFFSP RDKKYPNGTR PNRTAASGYW KATGTDKPII SSVGSQCLGM KKALVFYKGR  120
PPKGVKTDWM MTEYMLLDDY FSSRRPKESM RLDDWVLCRV RQKCKVPQQL GGRNYSSSSC  180
SPPFXRGHLQ GQEMTIENTN IPHGNHKLPA EYQMSPLESE ELDEKGQIMD FQEGSPEYSL  240
SNSPKTIDSN VRDVLKSIER ELSVGALDEL LPSQPEKRLK VSAPDNSPGN GSVFQISSPA  300
PSASYQQHFS EF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.13e-72NAC family protein