PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021293728.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | Dof | ||||||||
Protein Properties | Length: 159aa MW: 17946.9 Da PI: 9.5952 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 112 | 2.7e-35 | 41 | 99 | 2 | 60 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++k+++ prC+s++tkfCy+nny+++ Pr+fCk+C+ryWt+G alrnvPvG+grrk k XP_021293728.1 41 PDKIIPXPRCKSMETKFCYFNNYNVNXPRHFCKGCQRYWTAGWALRNVPVGAGRRKAKP 99 688999**************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MVMASQEGQG IKLFGTTITL HGRQVKEEQN KADHPALDKR PDKIIPXPRC KSMETKFCYF 60 NNYNVNXPRH FCKGCQRYWT AGWALRNVPV GAGRRKAKPX GRDLGGFAEG CLYDGSSGVH 120 QFELEGMMLD EWQVAAANGG FRQVFPMKRR RISCSGEMC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 148 | 152 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29160.1 | 5e-62 | Dof family protein |