PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293349.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family G2-like
Protein Properties Length: 351aa    MW: 38001.5 Da    PI: 7.235
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293349.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like25.52.9e-0812343154
         G2-like 31 tilelmkvkgLtlehvkSHLQkYR 54
                     ilelm+v+gLt+e+v+SHLQ +R
  XP_021293349.1 12 GILELMNVPGLTRENVASHLQ-FR 34
                    69******************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MTSRVDLGCS QGILELMNVP GLTRENVASH LQFRLYLKRI VVGSQGGISN PFVXPLDPNV  60
KIGHLEIXLQ ALCLWTIPPQ XIPALHAELL GRPTGNLVTA VDQPALLQAS LQGPXCIPVE  120
HGVAFGQSLV KCQSSISKHF PNLLYPLRCF FCXFGAWPSN NIGTQLPVAA LEGXFSERNM  180
LIDLLQQQXQ TTIQKQQQQQ STVPEPSRSI NVSHLALLYP SVICXFAAGN SLFLXQNGSF  240
SRTPVIDYSL LSSQSNNSSL NIGQVSDGDL QTTGVLSGYI PPASLSPSVS SCSLNADNCT  300
SRQVQTSSMT FKASRHLPGX VHSQCDVXGH YGFTKSGEVL DEAHFSNLGR Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.19e-14ARR-B family protein