PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293292.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WOX
Protein Properties Length: 316aa    MW: 35710.1 Da    PI: 8.7978
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.54.2e-2267126357
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     +R+++t+eql +Leel+++ +r+psa++++++A++l    +++ ++V++WFqN++a+e++
  XP_021293292.1  67 SRWNPTPEQLLALEELYRRgTRTPSAAQIQQIATRLrrfgKIEGKNVFYWFQNHKARERQ 126
                     7*****************99**************************************97 PP
2Wus_type_Homeobox111.35.2e-3666128365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++RW+PtpeQ+  Leely++G+rtP++++iq+i+++L+++Gkie+kNVfyWFQN+kaRerqk+
     XP_021293292.1  66 SSRWNPTPEQLLALEELYRRGTRTPSAAQIQQIATRLRRFGKIEGKNVFYWFQNHKARERQKR 128
                        68***********************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MGYPHITDLN LSHHSFNNAK PSPLIPKPNP ACPRNTTIIS SAPSPCHANI ANERRKAELN  60
EHPFGSSRWN PTPEQLLALE ELYRRGTRTP SAAQIQQIAT RLRRFGKIEG KNVFYWFQNH  120
KARERQKRRR ELETEQELKQ CDTERFEKKE PGSATTGCEI EQTKNKGPPS NFSKRSEEII  180
LTHGVAAAES GPNKWMQIQE KELQQIKSTA GRVSTWQAME LSCSPIYLIN SMTATSLATA  240
RASNTQNLCS LKPHQEDIAT LEDENREDQT LELFPLGSNN GNGINISKKD TTQVPITALN  300
TTFTPNQYFE FLPLKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.13e-41WOX family protein