PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293291.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WOX
Protein Properties Length: 317aa    MW: 35781.2 Da    PI: 8.7978
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.54.2e-2268127357
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     +R+++t+eql +Leel+++ +r+psa++++++A++l    +++ ++V++WFqN++a+e++
  XP_021293291.1  68 SRWNPTPEQLLALEELYRRgTRTPSAAQIQQIATRLrrfgKIEGKNVFYWFQNHKARERQ 127
                     7*****************99**************************************97 PP
2Wus_type_Homeobox111.35.3e-3667129365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++RW+PtpeQ+  Leely++G+rtP++++iq+i+++L+++Gkie+kNVfyWFQN+kaRerqk+
     XP_021293291.1  67 SSRWNPTPEQLLALEELYRRGTRTPSAAQIQQIATRLRRFGKIEGKNVFYWFQNHKARERQKR 129
                        68***********************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MGYPHITDLN LSHHSFNNAK PSPLIPKPNP ACPRNTTIIS SAPSPCHAAN IANERRKAEL  60
NEHPFGSSRW NPTPEQLLAL EELYRRGTRT PSAAQIQQIA TRLRRFGKIE GKNVFYWFQN  120
HKARERQKRR RELETEQELK QCDTERFEKK EPGSATTGCE IEQTKNKGPP SNFSKRSEEI  180
ILTHGVAAAE SGPNKWMQIQ EKELQQIKST AGRVSTWQAM ELSCSPIYLI NSMTATSLAT  240
ARASNTQNLC SLKPHQEDIA TLEDENREDQ TLELFPLGSN NGNGINISKK DTTQVPITAL  300
NTTFTPNQYF EFLPLKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.19e-42WOX family protein