PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021293286.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

ERF

Protein Properties

Length: 489aa MW: 53134.1 Da PI: 7.355

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021293286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.4	3.1e-17	128	177	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g XP_021293286.1 128 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 177 59*****.******93....35999********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MLRCSSTFQV PSPXSPEPRN HPRKEPFSFF FISLPVIPSY TFSVVLCVVS SAAGKIYQME 60 EAFRRLNGIT HVPDPDLRDS ITGNPKKCAA ATTTATTVTP TTTTTTTTTT TTNKRSLKEN 120 GGPGGTMRYR GVRRRPWGRY AAEIRDPQSK ERRWLGTFDT AEEAACAYDC AARAMRGIKA 180 RTNFVYPATE PHSANDHFLP PFNFTKQSQP SIRDLNTTRH QFGHSSNWSS FANPHVGDFS 240 GGSAPQRNAS LNMLLLRDLL NSSSNSSLHA PPHSLVDQFP FINGTSSAAS SSTTFSTPSS 300 LPGGTLLNSS TIATLRANDN ITGSFIGSTM TLPLKGNNSS HTTGVPAMST CQAEGMEFFA 360 QEPSDSGLLQ EIIQGFLPKP MSKKSDDLAR ISNCAQDSTV PPVSEMSFSQ SLSGLKKETE 420 NEHLGFYIDY QGVPHQQFES FNGISGSQVV PYGNEVAVNH LQLGEDCMLD DIFQYPDLLG 480 ALAARVQNA

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MLRCSSTFQV PSPXSPEPRN HPRKEPFSFF FISLPVIPSY TFSVVLCVVS SAAGKIYQME  60
EAFRRLNGIT HVPDPDLRDS ITGNPKKCAA ATTTATTVTP TTTTTTTTTT TTNKRSLKEN  120
GGPGGTMRYR GVRRRPWGRY AAEIRDPQSK ERRWLGTFDT AEEAACAYDC AARAMRGIKA  180
RTNFVYPATE PHSANDHFLP PFNFTKQSQP SIRDLNTTRH QFGHSSNWSS FANPHVGDFS  240
GGSAPQRNAS LNMLLLRDLL NSSSNSSLHA PPHSLVDQFP FINGTSSAAS SSTTFSTPSS  300
LPGGTLLNSS TIATLRANDN ITGSFIGSTM TLPLKGNNSS HTTGVPAMST CQAEGMEFFA  360
QEPSDSGLLQ EIIQGFLPKP MSKKSDDLAR ISNCAQDSTV PPVSEMSFSQ SLSGLKKETE  420
NEHLGFYIDY QGVPHQQFES FNGISGSQVV PYGNEVAVNH LQLGEDCMLD DIFQYPDLLG  480
ALAARVQNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24590.1	2e-13	ERF family protein