PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021292999.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 241aa MW: 27963 Da PI: 9.1054 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.5 | 2.8e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eyss XP_021292999.1 9 KRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 109.4 | 4e-36 | 79 | 174 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++++ +++++ e+++Lk+++e Lq+++Rh++Ge+L+sLslkeLq+LeqqL+++lk+iRskKn+l++e+i+elq+kek++qe+n++L k+++ XP_021292999.1 79 QLVATQPGSQANWSMEYNRLKAKVELLQKNHRHYMGENLDSLSLKELQNLEQQLDTALKHIRSKKNQLMYESISELQRKEKAIQEQNTMLAKQIK 173 555555556789*********************************************************************************98 PP K-box 100 e 100 e XP_021292999.1 174 E 174 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALIVFSH KGKLFEYSSD 60 SCMEKILERY ERYSYAERQL VATQPGSQAN WSMEYNRLKA KVELLQKNHR HYMGENLDSL 120 SLKELQNLEQ QLDTALKHIR SKKNQLMYES ISELQRKEKA IQEQNTMLAK QIKEKEKTIA 180 QQSQWGQQDH GLNASPFLLP QPHPCLNIGG TYQEEAPEMR RNELDLTLEP IYPCNLGCFA 240 A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-131 | MIKC_MADS family protein |