PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291924.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB_related | ||||||||
Protein Properties | Length: 1180aa MW: 131498 Da PI: 9.2709 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.8 | 1.6e-10 | 47 | 82 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e++++a +++G++ Wk++a + +R+ +++ XP_021291924.1 47 QWTKEELERFYEAYRKYGKD-WKKVATVVR-NRSVEMV 82 6*****************99.*********.**98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1180 aa Download sequence |
MAPSRKSKSV NKKFSYVNEV ASSKDGDSSA KRSGQRKRKL SDMLGPQWTK EELERFYEAY 60 RKYGKDWKKV ATVVRNRSVE MVEALYTMNR AYLSLPEGTA SVVGLIAMMT DHYCVMGGSD 120 SEQESNEGVG ASRKPQKRSR GKLRDQPSKS LDKSFPDLLQ FQSAASSYGC LSLLKRRRSE 180 SRPRAVGKRT PRVPISFSHD KNRGERYFSP IRQGMKLKVD TVDDDVAHEI ALVLTEASQR 240 GGSPQVSRTP NRKAEASSPI LNSERMNAES ETTSAKIHGS EMDEDACELS LGSTEADNAD 300 YARGKNYSMN IEGTGTIEVQ QKGKRYYRRK PGVEESVNNH LEDTKEACSG TEEDQKLCDF 360 KGKFEAEVAD TKTSRGSIKG PRKRSKKVLF GGVEDTSFDA LQTLADLSLM MPETAADTES 420 SVQFKEEKNE VVEKTKLKGN HPVSGAKGSA PKTCKQGKVF GHDVRAIPEA KEETHPGNVG 480 MRKRRQKSSP YKLQIPKDET DADSHLGESR NIEASDEVKN LPSKCKRSNN VAHSKQGKSV 540 RPPEHRSSST DHGRDLNNSA PSTIQVSPVN RVNLPTKVRS KRKIDAQKPV IGKDIKSSDS 600 IVKGKFSVPV SLFQDRALNL KEKLCNFLCP YQARRWCTFE WFYSTIDYPW FAKREFVEYL 660 DHVGLGHVPR LTRVEWGVIR SSLGKPRRFS EQFLKEEREK LHQYRESVRM HYAELRAGIG 720 EGLPTDLARP LSVGQRVIAI HPKTRQIHDG NVLIVDRSRY RIQFDSTELG VESVMDIDCM 780 PLNPLENLPA SLVRQNAAVN KFFENFHELK MNGQPKESKM EENIKFAPCE ENANSPSRTS 840 PSTFNVGNIS QPVKVDPSSP NLQLKVGPME TVYTQQAVNS QPSALALIQA READVEALSQ 900 LTRALDKKEA VVSELRRMND EVLENQKGGD NSIKDSDSFK KQYAAVLLQL NEVNEQVSSA 960 LFCLRQRNTY QGTSSVRLLK PLAKIGEHGC QLSSFDHSMH HAQESVSHVA EIVESSRTKA 1020 RSMVDAAMQA MSSLRKGGKS IERIEDAIDF VNNQLSVDDL SVPSLRSSIP IDSARSTVTF 1080 HDHLTASVSN PLATGHAPDT KLSDQDDLRI PSDLIAHCVA TLLMIQKCTE RQFPPGDVAQ 1140 VLDSAVTSLK PCCSQNLSIY AEIQKCMGII RNQILALVPT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 481 | 486 | MRKRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 0.0 | MYB_related family protein |