PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021290986.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 214aa    MW: 24374.2 Da    PI: 5.4285
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021290986.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.2e-1882132255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g
  XP_021290986.1  82 SYRGVRRRP-WGKFAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFAMRG 132
                     69*******.**********422...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MDSCLFHSPN SNSSSESSFG SPEFFPLHNN YLPFNENDSE EMLLYGLLAE ATQETSEITY  60
PNQVKEEEVS SMENESPKKE KSYRGVRRRP WGKFAAEIRD STRHGIRVWL GTFDSAEAAA  120
LAYDQAAFAM RGSAAILNFP VERVQESLRD MKCHQEEGCS PVVALKRKHS MRRKMISRSK  180
KERDVRINNA VVLEDLGADY LEELLTTSET ARPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-71ERF family protein