PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021290094.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 251aa    MW: 27943.5 Da    PI: 8.1925
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021290094.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.2e-2181130255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+G+r+++ +g+W+AeIrdp     +  r++lg++ taeeAa+a+++a+k+++g
  XP_021290094.1  81 VYRGIRQRP-WGKWAAEIRDPH----KgVRVWLGTYNTAEEAARAYDEAAKRIRG 130
                     69*******.**********72....35************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MCGGAIISDF IAVKRGRKLT AEDLWSELDT FSDLLGLDYN GKDAFTQSGN TKVGPKGTQL  60
NKVTSRGTGK EGKTQRTRKN VYRGIRQRPW GKWAAEIRDP HKGVRVWLGT YNTAEEAARA  120
YDEAAKRIRG DKAKLNFPQA PPAPVQPPAK KSRIVAPELS HANFETIGAP PPPPTPQPYM  180
GFAYGNEVYR PCEAVETSEL ELKEQIWSLE SFLGLEPETP QPSGNGEPDS VDLWMLDDLV  240
THHQQQRQLV Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-48ERF family protein