PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021289524.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

TALE

Protein Properties

Length: 648aa MW: 70319.6 Da PI: 7.3008

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021289524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2e-09	446	483	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gL+ +qV++WF N R + XP_021289524.1 446 FEHflHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVR 483 554459******************************88 PP
2	BELL	111.1	6.3e-36	316	384	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e ++kk++L+s+l+eV++rYkqy++q+q+v++sFe vaglg+a+pY++lAlka+S+hFrcLk ai++q+ XP_021289524.1 316 ESRRKKSRLISMLDEVYRRYKQYYQQMQAVVASFEYVAGLGNAAPYANLALKAMSKHFRCLKSAITNQL 384 7899**************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 648 aa Download sequence
MAEGFEPYHV PQQSRRDKLR IVAQNHPACV EATAATLSGC SALLPLYDPS LLSSDLLTCA 60 ANASATAGSH DFHHQTNHLS ASASGKNSPV CVVKEEGVNF MGFVGGIVNA SSSSSTSHHP 120 YLDPQSSLPL NPSSIQDMNN NPFLYTPQSL QNLRDFDHSY NNGGEVVVYK PEALSLNHES 180 STTGQGLSLS LSSHNTHQNN LPLELNLQRY ESTIYSDKVT ASGYVVPGIV GASASTSNEV 240 SRSSVPLGPF TGYASILKGS RFLRPAQQLL EELCDVGRGS YAEKITPDSS LMEPPLENLS 300 PTGIIDDPLG GGDGGESRRK KSRLISMLDE VYRRYKQYYQ QMQAVVASFE YVAGLGNAAP 360 YANLALKAMS KHFRCLKSAI TNQLQFTNKA HGQISPGKEG PRFGSTDRSL YSRPVHSAGF 420 LEHQPVWRPQ RGLPERAVTV LRAWLFEHFL HPYPTDTDKL MLAKQTGLSR SQVSNWFINA 480 RVRLWKPMVE EIHMLETRQA LKASQKEDRN ANKSSDHLSS ANSLASENPS TSTQRVQDTP 540 SKRTRSELPD IPVGSEPLNL SYNSLSSHPH VGVGVSMAGG SGGVSLTLGL HQNNGIGLSE 600 PFPINAAQRF GLGLEVSSEG YVIGGFEAQN RHFGRDVIGG QLLHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 648 aa Download sequence

MAEGFEPYHV PQQSRRDKLR IVAQNHPACV EATAATLSGC SALLPLYDPS LLSSDLLTCA  60
ANASATAGSH DFHHQTNHLS ASASGKNSPV CVVKEEGVNF MGFVGGIVNA SSSSSTSHHP  120
YLDPQSSLPL NPSSIQDMNN NPFLYTPQSL QNLRDFDHSY NNGGEVVVYK PEALSLNHES  180
STTGQGLSLS LSSHNTHQNN LPLELNLQRY ESTIYSDKVT ASGYVVPGIV GASASTSNEV  240
SRSSVPLGPF TGYASILKGS RFLRPAQQLL EELCDVGRGS YAEKITPDSS LMEPPLENLS  300
PTGIIDDPLG GGDGGESRRK KSRLISMLDE VYRRYKQYYQ QMQAVVASFE YVAGLGNAAP  360
YANLALKAMS KHFRCLKSAI TNQLQFTNKA HGQISPGKEG PRFGSTDRSL YSRPVHSAGF  420
LEHQPVWRPQ RGLPERAVTV LRAWLFEHFL HPYPTDTDKL MLAKQTGLSR SQVSNWFINA  480
RVRLWKPMVE EIHMLETRQA LKASQKEDRN ANKSSDHLSS ANSLASENPS TSTQRVQDTP  540
SKRTRSELPD IPVGSEPLNL SYNSLSSHPH VGVGVSMAGG SGGVSLTLGL HQNNGIGLSE  600
PFPINAAQRF GLGLEVSSEG YVIGGFEAQN RHFGRDVIGG QLLHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	2e-69	TALE family protein