PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021289411.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 341aa MW: 37663.9 Da PI: 7.3646 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.7 | 4.3e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + + + g++R++k+c++rw++yl XP_021289411.1 14 KGPWSPEEDAKLKEYIEKHGTGgNWIALPPKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 36.2 | 1.4e-11 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed ++ + + G++ W+ Ia+ ++ gRt++++k++w++ XP_021289411.1 69 GEFSDDEDRIICTLYASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDAKLKEYIE KHGTGGNWIA LPPKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDDEDRIIC TLYASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLFGM 120 ATQSHRKPHH VHHASFSSLL QSPSPSSPSP SPPLSSPSSA LLYNCSNNTY NTPVRSFRCF 180 EVSYSSNFSN SSASCVTAAS VLQPQESLLG PTQNYRLQDG LQMFVGEASC SSSDGSCSNQ 240 ISQNKELEYE YGAARGSNGA NNGEQMGMHS YFYNEADESQ TLMASNGGCA NGWSEKSSNG 300 LWGETIPLDY GLEEIKQLIC TSSCNSLFFD ENKAEEKVMY Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 5e-78 | MYB family protein |