PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021288653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB_related | ||||||||
Protein Properties | Length: 75aa MW: 8727.45 Da PI: 4.1165 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36 | 1.6e-11 | 27 | 69 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 + ++++E+ l+++ +++ G + W++Ia +++ gRt++++ +w++ XP_021288653.1 27 LQFSEDEETLIIRMFNLVGER-WTLIAGRIP-GRTAEEIEKYWNT 69 579******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 75 aa Download sequence |
MAESEHSSSE DASMDSIEDH NKQDSELQFS EDEETLIIRM FNLVGERWTL IAGRIPGRTA 60 EEIEKYWNTR YSTSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46410.1 | 1e-17 | MYB_related family protein |