PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021288544.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 143aa MW: 16086.2 Da PI: 10.8071 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.8 | 1.7e-20 | 78 | 126 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +grW+AeIrd g+r r +lg+f+taeeAa a+++a+ kl+g XP_021288544.1 78 RYRGVRQRP-WGRWAAEIRD----GRRMRLWLGTFDTAEEAAVAYDQAAVKLRG 126 8********.**********....336*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MSSPPLPNQK PQQPFRRRIV RITVTDADAT DSSSDDETTS PKRNQNLPKK KLVNEITIGM 60 STKENDVIAG PSQGKVKRYR GVRQRPWGRW AAEIRDGRRM RLWLGTFDTA EEAAVAYDQA 120 AVKLRGPNAP TNFKLLDCNV VHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 3e-19 | ERF family protein |