PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021288005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 300aa MW: 34183 Da PI: 7.307 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 173.5 | 6.3e-54 | 11 | 137 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deelv++yL +kv++++ l + + evd++k+ePwd+p++++ + kewyf+s+rd+kyatg r+nrat+sgyWkatgkd+++ls XP_021288005.1 11 LPPGFRFHPRDEELVCDYLMRKVATSTDAL-QLMIEVDLNKCEPWDIPETARVGGKEWYFYSQRDRKYATGLRTNRATASGYWKATGKDRAILS- 103 79************************9777.8899*************9888999***************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg+lvg++ktLvfy+grapkg+ktdWvmhe+rle XP_021288005.1 104 KGTLVGMRKTLVFYQGRAPKGRKTDWVMHEFRLE 137 999****************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MSNISLVEAK LPPGFRFHPR DEELVCDYLM RKVATSTDAL QLMIEVDLNK CEPWDIPETA 60 RVGGKEWYFY SQRDRKYATG LRTNRATASG YWKATGKDRA ILSKGTLVGM RKTLVFYQGR 120 APKGRKTDWV MHEFRLEGPL APPKLSTLKE DWVLCRVFYK NTEITAKPRS MGSCYDDTGS 180 SPLPPLMDSY ITFDQTQPNL DEYEQVPCFS DFSQSQTNPF FTNTTYMEPS LPAKTQPALR 240 QMPMNACLDS FPCDKKVIKA VLNHLTKLDS YLNVKESPSF GEGCSESYLS EVGMPDIWNH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.2 | 1e-128 | NAC family protein |