PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021287038.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 291aa    MW: 31672.1 Da    PI: 8.3715
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021287038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20130179255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+W+AeIrdp+    r +r++lg+f taeeAa+a+++a+  ++g
  XP_021287038.1 130 NYRGVRQRP-WGKWAAEIRDPR----RaTRVWLGTFNTAEEAARAYDKAAIDFRG 179
                     59*******.**********82....48**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MQRCMKRQRL SPAPQSMSPS PPPHHRLSPE QELSVMVSRL KNVITGSTPT TFTGTAVDFP  60
FQFGASGAST STVAAGYNAD CGNMVLQASE VMDKCHVCKF DGCLXCNLFP PSQQEVKKGS  120
TTKTKRVKKN YRGVRQRPWG KWAAEIRDPR RATRVWLGTF NTAEEAARAY DKAAIDFRGP  180
RAKLNFPFPD SSSNGTVTTT PPPPPGAATT TVTTAVGLDQ GNSSSLHVQQ ESERNAISLE  240
RNAELGFGTD QFWDGIGELD EIQQWMMTMT DFGGDNNSSD SATTTGNANS Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-30ERF family protein