PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286575.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 328aa    MW: 37934.3 Da    PI: 7.2355
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286575.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM152.32.3e-47551813128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 
                     pGfrFhPt+eel+++yL+  + gkkl+  +vi  ++iy+++PwdLp   k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d++++s   
  XP_021286575.1  55 PGFRFHPTEEELLDFYLRSMIYGKKLRY-DVIGFLNIYHHDPWDLPGLSKIGEREWYFFVPRDRKHGSGGRPNRTTENGFWKATGSDRKIVSLsd 148
                     9**************************9.99***************8778899*************************************99766 PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++ +glkktLvfykgrap+g+ktdWvm+eyrl
  XP_021286575.1 149 PKRIIGLKKTLVFYKGRAPRGSKTDWVMNEYRL 181
                     6778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MQQHFSFCIF YLIHRLHILN QAENLKTNYS SIISLTTMSS CQSNIDDPTP EIELPGFRFH  60
PTEEELLDFY LRSMIYGKKL RYDVIGFLNI YHHDPWDLPG LSKIGEREWY FFVPRDRKHG  120
SGGRPNRTTE NGFWKATGSD RKIVSLSDPK RIIGLKKTLV FYKGRAPRGS KTDWVMNEYR  180
LPDGHPLPKD IVLCKIYRKA TSLKVLEQRA ALEEELKAMN TSPSSPLSSL ETISFCSPKE  240
DVVPSISVPQ VVLKKEIEEE EAMVEEKRDG TAKENETPST SLQFPLGKEK LPELQVPKMT  300
DWNQDQFWTQ LTSPWFQNLT PYANILNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-118NAC family protein