PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021285071.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family Dof
Protein Properties Length: 244aa    MW: 24873.6 Da    PI: 8.1902
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021285071.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.62.8e-382685362
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    ++ l+cprCdst tkfCyynny+lsqPryfCk+CrryWt+GG+lrnvPvGgg+rk  k+s
  XP_021285071.1 26 TEPLPCPRCDSTSTKFCYYNNYNLSQPRYFCKSCRRYWTQGGTLRNVPVGGGTRKASKRS 85
                    57899**************************************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MPADSGDRRP VRVPGTMGSH PPPKLTEPLP CPRCDSTSTK FCYYNNYNLS QPRYFCKSCR  60
RYWTQGGTLR NVPVGGGTRK ASKRSRCSSG SSPSVATSSS SSSVTHEAES MPMAAANPVS  120
VMPGPGVKPE MGLADVNLNE SVDLPVNGSF TSFLSSQGEG YLSLGGYGFG AGSGFDGVWG  180
YPGNGYLGGF SGGGSGGPGG VIGGTTGCNQ WQTTSDVEGG GGLADGDCFG WPGLAISAPG  240
KGLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G47655.11e-27Dof family protein