PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021284325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 209aa MW: 24437.9 Da PI: 8.7846 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.6 | 1.9e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skRrngi+KKA+E+ vLCda+v++iif+s+gk++ey+s XP_021284325.1 9 KRIENSSNRQVTYSKRRNGIMKKAKEITVLCDARVSLIIFASSGKMHEYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 87.6 | 2.4e-29 | 71 | 167 | 1 | 97 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 y+k+sgk+l++ak+e+l++e++++kke++++ e+Rhl+Ged++sL++keL+ +e++Le++l +R+k++++l e +++++ e+++++ n + XP_021284325.1 71 YHKTSGKRLWDAKHENLSNEIDRIKKENDSMHIELRHLKGEDITSLQYKELMAIEDALENGLACVRAKQMDVLDETRKNTKMLEEDNKQLNFIVN 165 7999***************************************************************************************9888 PP K-box 96 kk 97 ++ XP_021284325.1 166 QQ 167 77 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MGRGKIEIKR IENSSNRQVT YSKRRNGIMK KAKEITVLCD ARVSLIIFAS SGKMHEYCSP 60 STNLIDILDQ YHKTSGKRLW DAKHENLSNE IDRIKKENDS MHIELRHLKG EDITSLQYKE 120 LMAIEDALEN GLACVRAKQM DVLDETRKNT KMLEEDNKQL NFIVNQQHIA YENAREQMDN 180 GYQRARDFSS QMPFAFRVQP MQPNLQERM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 4e-92 | MIKC_MADS family protein |