PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021282853.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 314aa    MW: 35491.1 Da    PI: 4.6567
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021282853.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-1993142355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr ++ +g+++AeIrd + ng   r++lg+f+tae Aa a+++a+++++g
  XP_021282853.1  93 YRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFDTAEAAALAYDQAALAMRG 142
                     9*******.**********44465..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MDSSCFQYPN LQFSPAQSSS SYVSQENFSP EYFNYQNQAL PFNENDSQEM LLLGVLNQAP  60
ENSFDTTSVN TFRDDNEVNS QANEEETGKE ISYRGVRKRP WGKYAAEIRD STRNGVRVWL  120
GTFDTAEAAA LAYDQAALAM RGPMAILNFP MDKVYESLQE MNYGFEEGYS PVLTMKKRYS  180
MKTKRSGSKK KKEKEMGMEN ILVLEDLGAD YLEELLSISE SSATPYWLEP ALMINMQELS  240
RIDVVHSDTL SVYSKVKQAL STLDWALRCG TMHPPRVAAS AKWASPWLLN DIIKLTQDLL  300
KISSDLAAMA HLLI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176192KKRYSMKTKRSGSKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-41ERF family protein