PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021282352.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

MYB_related

Protein Properties

Length: 1169aa MW: 130366 Da PI: 9.6052

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021282352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.8	5.1e-08	45	80	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W + E e++++a +++G++ Wk++a+ + +R+ +++ XP_021282352.1 45 QWNKVEIERFYKAYREYGKD-WKKVAAAVR-NRSTEMV 80 6***************99.*****.99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1169 aa Download sequence
MAPTRKSKSV NKRYSSVYEV SPDKDAGNSS KSKPKKKLAD KLGSQWNKVE IERFYKAYRE 60 YGKDWKKVAA AVRNRSTEMV EALYLMNRAY LSLPDGTASV IGLIAMMTDH YSVLGGSDCE 120 RESNEPSEIP QKAQKRKRAK VHLGSSKEDV VQPLSIASSQ GCLSLLKKAG LNGIHPHAVR 180 KRTPRVPVSY SYRRDDTESD IPPNKRVKKS ETDDNDDEHV AALTLTGALQ RGGSPQVSQT 240 PYKRAECKRS SPVESYDRMS PQPETTKAKL DDSSYECWME GRPRGMEPVI GTHARDADPL 300 MDMEVVVTIE GHRKGKKFYR KKMKVEETKN NLSDDGGEAC SGTDERIRGS TLKGKVDMEI 360 SSAKSEQLSP WSQRKRSNKK LVFGDESSSI DALLTLANLS TSMLPTSIME SGLESSVKLK 420 ENRITLESVD KSSAPEAAST GHHRDKIKHL GPKEKVLNSI TGVEDATSRK LKVGRNSAME 480 DNVVSEAKLQ PEPTNNSWKR KRKSFSSKIS NAEAPMDSHL RQSFDKEDMA EEQNKYLTKG 540 KCGGQSSVQS RQWKSFRVSE DSPTNDDPKM AGIDSVVLTS QVPVPNPVSL ATKHQSRRKM 600 NLKRALLSTD RSSSKCTLKN QPNKQSVTQD RLKEQLSSCL SSNLARRWYS FEWFYSAIDY 660 AWFAKREFVE YLNHVGLGHV PRLTRVEWGV IRSSLGKPRR FSERFLHEER EKLKQYRESV 720 RQHYSQLRVG TREGLPTDLA YPLSVGQRVI AIHPKTREVH DGKVLTVDHD RCRVQFDSPE 780 LGVEFVTDVD CMPLNPLENM PEALRRQNLA FDKFSMTPKQ SQVNSHSDFG GSMVFTSTGR 840 LENGTSPVNI SANQIKVDAN CNILHAKAAV PHVVSAHQAA YGQPLTMAHI QGRETAIRAM 900 SELNGALDKK EALLMELRNM NNDISENRNG ESCLKDSEPF KKHIATASSA LLNLRQRNAY 960 PTNLLSSWQK PPTNSNFFGG LTSSVDSSHV SPESGSGVGD IVQGSRLKAH AMVDAAIKAM 1020 SSMKEGEDAF MRIGEALDSL DKRQFTSDIR MPLMKSREQE NGSMGYRSHL VSSTSKPVAA 1080 VWATNPKSQE ACDKNEEQVP SELIASCVAT LLMIETCTER QYPPADVAQI IDSAVTSLHP 1140 CFPQNLPIYR EIQMCMGRIK TQILALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1169 aa Download sequence

MAPTRKSKSV NKRYSSVYEV SPDKDAGNSS KSKPKKKLAD KLGSQWNKVE IERFYKAYRE  60
YGKDWKKVAA AVRNRSTEMV EALYLMNRAY LSLPDGTASV IGLIAMMTDH YSVLGGSDCE  120
RESNEPSEIP QKAQKRKRAK VHLGSSKEDV VQPLSIASSQ GCLSLLKKAG LNGIHPHAVR  180
KRTPRVPVSY SYRRDDTESD IPPNKRVKKS ETDDNDDEHV AALTLTGALQ RGGSPQVSQT  240
PYKRAECKRS SPVESYDRMS PQPETTKAKL DDSSYECWME GRPRGMEPVI GTHARDADPL  300
MDMEVVVTIE GHRKGKKFYR KKMKVEETKN NLSDDGGEAC SGTDERIRGS TLKGKVDMEI  360
SSAKSEQLSP WSQRKRSNKK LVFGDESSSI DALLTLANLS TSMLPTSIME SGLESSVKLK  420
ENRITLESVD KSSAPEAAST GHHRDKIKHL GPKEKVLNSI TGVEDATSRK LKVGRNSAME  480
DNVVSEAKLQ PEPTNNSWKR KRKSFSSKIS NAEAPMDSHL RQSFDKEDMA EEQNKYLTKG  540
KCGGQSSVQS RQWKSFRVSE DSPTNDDPKM AGIDSVVLTS QVPVPNPVSL ATKHQSRRKM  600
NLKRALLSTD RSSSKCTLKN QPNKQSVTQD RLKEQLSSCL SSNLARRWYS FEWFYSAIDY  660
AWFAKREFVE YLNHVGLGHV PRLTRVEWGV IRSSLGKPRR FSERFLHEER EKLKQYRESV  720
RQHYSQLRVG TREGLPTDLA YPLSVGQRVI AIHPKTREVH DGKVLTVDHD RCRVQFDSPE  780
LGVEFVTDVD CMPLNPLENM PEALRRQNLA FDKFSMTPKQ SQVNSHSDFG GSMVFTSTGR  840
LENGTSPVNI SANQIKVDAN CNILHAKAAV PHVVSAHQAA YGQPLTMAHI QGRETAIRAM  900
SELNGALDKK EALLMELRNM NNDISENRNG ESCLKDSEPF KKHIATASSA LLNLRQRNAY  960
PTNLLSSWQK PPTNSNFFGG LTSSVDSSHV SPESGSGVGD IVQGSRLKAH AMVDAAIKAM  1020
SSMKEGEDAF MRIGEALDSL DKRQFTSDIR MPLMKSREQE NGSMGYRSHL VSSTSKPVAA  1080
VWATNPKSQE ACDKNEEQVP SELIASCVAT LLMIETCTER QYPPADVAQI IDSAVTSLHP  1140
CFPQNLPIYR EIQMCMGRIK TQILALIPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein