PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021282349.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

MYB_related

Protein Properties

Length: 1181aa MW: 131633 Da PI: 9.5272

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021282349.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.8	5.1e-08	44	79	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W + E e++++a +++G++ Wk++a+ + +R+ +++ XP_021282349.1 44 QWNKVEIERFYKAYREYGKD-WKKVAAAVR-NRSTEMV 79 6***************99.*****.99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1181 aa Download sequence
MAPTRKSKSV NKRYSSVYEV SPDKDAGNSS KSKPKKLADK LGSQWNKVEI ERFYKAYREY 60 GKDWKKVAAA VRNRSTEMVE ALYLMNRAYL SLPDGTASVI GLIAMMTDHY SVLGGSDCER 120 ESNEPSEIPQ KAQKRKRAKV HLGSSKEDVV QPLSIASSQG CLSLLKKAGL NGIHPHAVRK 180 RTPRVPVSYS YRRDDTESDI PPNKRVKKSE TDDNDDEHVA ALTLTGALQR GGSPQVSQTP 240 YKRAECKRSS PVESYDRMSP QPETTKAKLD DSSYECWMEG RPRGMEPVIG THARDADPLM 300 DMEVVVTIEG HRKGKKFYRK KMKVEETKNN LSDDGGEACS GTDERIRGST LKGKVDMEIS 360 SAKSEQLSPW SQRKRSNKKL VFGDESSSID ALLTLANLST SMLPTSIMES GLESSVKLKE 420 NRITLESVDK SSAPEAASTG HHRDKIKHLG PKEKVLNSIT GVEDATSRKL KVGRNSAMED 480 NVVSEAKLQP EPTNNSWKRK RKSFSSKLQI SNAEAPMDSH LRQSFDKEDM AEEQNKYLTK 540 GKCGGQSSVQ SRQWKSFRVS EDSPTNDDPK MAGIDSVVLT SQVPVPNPVS LATKHQSRRK 600 MNLKRALLST DRSSSKCTLK NQPNKQSVTQ DRLKEQLSSC LSSNLARRWY SFEWFYSAID 660 YAWFAKREFV EYLNHVGLGH VPRLTRVEWG VIRSSLGKPR RFSERFLHEE REKLKQYRES 720 VRQHYSQLRV GTREGLPTDL AYPLSVGQRV IAIHPKTREV HDGKVLTVDH DRCRVQFDSP 780 ELGVEFVTDV DCMPLNPLEN MPEALRRQNL AFDKFSMTPK QSQVNSHSDF GGSMVFTSTG 840 RLENGTSPVN ISANQIKVDA NCNILHAKAA VPHVVSAHQA AYGQPLTMAH IQGRETAIRA 900 MSELNGALDK KEALLMELRN MNNDISENRN GESCLKDSEP FKKHIATVLV ELKEASGQAS 960 SALLNLRQRN AYPTNLLSSW QKPPTNSNFF GGLTSSVDSS HVSPESGSGV GDIVQGSRLK 1020 AHAMVDAAIK AMSSMKEGED AFMRIGEALD SLDKRQFTSD IRMPLMKSRE QENGSMGYRS 1080 HLVSSTSKPV AAVWATNPKS QEACDKNEEQ VPSELIASCV ATLLMIETCT ERQYPPADVA 1140 QIIDSAVTSL HPCFPQNLPI YREIQMCMGR IKTQILALIP T

Sequence ? help Back to Top

Protein Sequence Length: 1181 aa Download sequence

MAPTRKSKSV NKRYSSVYEV SPDKDAGNSS KSKPKKLADK LGSQWNKVEI ERFYKAYREY  60
GKDWKKVAAA VRNRSTEMVE ALYLMNRAYL SLPDGTASVI GLIAMMTDHY SVLGGSDCER  120
ESNEPSEIPQ KAQKRKRAKV HLGSSKEDVV QPLSIASSQG CLSLLKKAGL NGIHPHAVRK  180
RTPRVPVSYS YRRDDTESDI PPNKRVKKSE TDDNDDEHVA ALTLTGALQR GGSPQVSQTP  240
YKRAECKRSS PVESYDRMSP QPETTKAKLD DSSYECWMEG RPRGMEPVIG THARDADPLM  300
DMEVVVTIEG HRKGKKFYRK KMKVEETKNN LSDDGGEACS GTDERIRGST LKGKVDMEIS  360
SAKSEQLSPW SQRKRSNKKL VFGDESSSID ALLTLANLST SMLPTSIMES GLESSVKLKE  420
NRITLESVDK SSAPEAASTG HHRDKIKHLG PKEKVLNSIT GVEDATSRKL KVGRNSAMED  480
NVVSEAKLQP EPTNNSWKRK RKSFSSKLQI SNAEAPMDSH LRQSFDKEDM AEEQNKYLTK  540
GKCGGQSSVQ SRQWKSFRVS EDSPTNDDPK MAGIDSVVLT SQVPVPNPVS LATKHQSRRK  600
MNLKRALLST DRSSSKCTLK NQPNKQSVTQ DRLKEQLSSC LSSNLARRWY SFEWFYSAID  660
YAWFAKREFV EYLNHVGLGH VPRLTRVEWG VIRSSLGKPR RFSERFLHEE REKLKQYRES  720
VRQHYSQLRV GTREGLPTDL AYPLSVGQRV IAIHPKTREV HDGKVLTVDH DRCRVQFDSP  780
ELGVEFVTDV DCMPLNPLEN MPEALRRQNL AFDKFSMTPK QSQVNSHSDF GGSMVFTSTG  840
RLENGTSPVN ISANQIKVDA NCNILHAKAA VPHVVSAHQA AYGQPLTMAH IQGRETAIRA  900
MSELNGALDK KEALLMELRN MNNDISENRN GESCLKDSEP FKKHIATVLV ELKEASGQAS  960
SALLNLRQRN AYPTNLLSSW QKPPTNSNFF GGLTSSVDSS HVSPESGSGV GDIVQGSRLK  1020
AHAMVDAAIK AMSSMKEGED AFMRIGEALD SLDKRQFTSD IRMPLMKSRE QENGSMGYRS  1080
HLVSSTSKPV AAVWATNPKS QEACDKNEEQ VPSELIASCV ATLLMIETCT ERQYPPADVA  1140
QIIDSAVTSL HPCFPQNLPI YREIQMCMGR IKTQILALIP T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	1e-159	MYB_related family protein