PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021281915.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 338aa    MW: 38338.4 Da    PI: 4.9872
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021281915.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.84.2e-5361331128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lppGfrFhPtdeel+ +yLk+k+eg++lel evi+ +d+yk++Pw+Lp k  + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkd++v+
  XP_021281915.1   6 LPPGFRFHPTDEELIGYYLKRKTEGQELEL-EVIPVIDLYKFDPWELPeKsFLPKRDLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVV 99 
                     79***************************9.99**************95334445667************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + +++++g +ktLvfy+grap g +t Wvmheyrl
  XP_021281915.1 100 C-QSAVTGYRKTLVFYQGRAPLGDRTGWVMHEYRL 133
                     *.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MVGASLPPGF RFHPTDEELI GYYLKRKTEG QELELEVIPV IDLYKFDPWE LPEKSFLPKR  60
DLEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKVVC QSAVTGYRKT LVFYQGRAPL  120
GDRTGWVMHE YRLSDAPSQG STNQGAFALC RVVKRNEQKA SDAHGEPKGT RVGSSSTNVE  180
PTSTRICNEP LSVGDISCQT SYPNNESRYS SPTTSPYPCE VTQMQPFEPV SVDTDPASVW  240
VSPDLILDSS KDYPRICETA SQYFPQYEFP ISGTPWQQYD QTDFSPSSSY SNFGEIEHVD  300
DLSRMNCMSP YSGHANYMDF YGNEGYDQSG SYSYLNPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.11e-109NAC family protein