PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021281843.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 329aa    MW: 36782.2 Da    PI: 5.319
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021281843.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.2e-19183233255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta +Aaka+++a+ kl+g
  XP_021281843.1 183 HYRGVRQRP-WGKFAAEIRDPTRRG--SRIWLGTFDTAIDAAKAYDRAAFKLRG 233
                     8********.**********97665..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
METSSEVSCA LQYIKQYLLD EFSPVGLGSS FSCENQWITE AKPEVSTSQS ESLYLQTSSS  60
DSSLTVSNFN CLDDDDFFKF SPHFPGFKPN GSDVFEIESK PQIVDLMTPK SLSSSACAFE  120
FEVKPQIVAL SPTNPQASLN SSSQNRKPSL KISLPNKVEW IHFGKPDLAQ VEPKNSNSED  180
RKHYRGVRQR PWGKFAAEIR DPTRRGSRIW LGTFDTAIDA AKAYDRAAFK LRGSKAILNF  240
PLEAGRLVAR DVDGERKRCR DDSEGEERRV KAVKRENDDV TKARDNGDVP LTPSNWASLL  300
DWDTDVKGIF NVPPLSPYPS LGFPEVMVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.15e-59ERF family protein