PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021281503.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 255aa MW: 28951.2 Da PI: 8.3608 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88 | 5.3e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRr+g+lKKA+EL +LCdaevaviifs+tgkl+e++s XP_021281503.1 9 KRIENANSRQVTFSKRRAGLLKKAKELAILCDAEVAVIIFSNTGKLFEFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 73 | 8.8e-25 | 82 | 173 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +e++ +++ ++e+++Lk+ei +Lq +q +llG+dL+sLslkeLq LeqqL+++l ++++kK++ll+eq+e+++ +e+++ en++Lr++++e XP_021281503.1 82 VEHKAEKQDSKEADNLKDEIAKLQMKQLQLLGKDLTSLSLKELQLLEQQLNEGLLSVKEKKEQLLMEQLEQSRVQEQRAMLENETLRRQVQE 173 5667788999*******************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MGRGKIEIKR IENANSRQVT FSKRRAGLLK KAKELAILCD AEVAVIIFSN TGKLFEFASS 60 GMKKTLSRYD KCSQGTPEIA LVEHKAEKQD SKEADNLKDE IAKLQMKQLQ LLGKDLTSLS 120 LKELQLLEQQ LNEGLLSVKE KKEQLLMEQL EQSRVQEQRA MLENETLRRQ VQELRGFFPS 180 TARPVQSYLE CYAVERKNPL MNHSIPSPDV TCNCTVEKGD SDTTLYLGLP SDCHKRKKPE 240 RETHSNDSES QLGLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 4e-69 | MIKC_MADS family protein |