PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021280711.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 315aa MW: 35431.9 Da PI: 5.2985 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.6e-19 | 75 | 123 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a+++ ++k++g XP_021280711.1 75 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 123 9*******.**********954...4************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 315 aa Download sequence |
MCGGAIIAEF IPRNRGRRVT ASDLWPFAKI NGFSSDLSQP KPDDSFSHFK RPQPQPSLGD 60 EQVEKKAKRQ RKNLYRGIRQ RPWGKWAAEI RDPRKGVRVW LGTFNTAEEA ARAYDREARK 120 IRGKKAKVNF PNEDDAFSTE YNLKHSNNHQ INNNHNSAAG WNPSPNSNPS IYQQPSNNNL 180 SNYGFNYDLN QIGGYATDRI VISGEENSGS GSEGVNSGDQ NVNFRYVPMK AEEEEKREAP 240 VNEAVAEVQD DDIEVQKLSE ELMAYENYMK FYQIPYLDGQ SATQNAVAPQ ESVVGELWSF 300 DDDGIAVPVT SSTAM |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 66 | 71 | KAKRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G16770.1 | 5e-36 | ERF family protein |