PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021280562.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 369aa MW: 39406.8 Da PI: 6.9004

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021280562.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	71.6	1.2e-22	250	312	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL kv++L+ eN +L++e+++l+++++kl+ e+ XP_021280562.1 250 ERELKRERRKQSNRESARRSRLRKQAETEELGHKVESLTVENATLRSEINQLTEKSEKLRLEN 312 89*********************************************************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MGNNDEGKSS KSDKSSLPVP TDQTNVHVYP DWAAMQAYYG PRVAIPPYYN SAVASGHAPP 60 PYMWGPPQPM MPPYGAPYAT IYSHGGVYAH PAVPLAAAAV ETPTKSLGNS ERGLMKKLKG 120 FDGLAMSIGN GTAENADGGA EPRPSQSAET EGSTDGSDGN TTGTDQTGRK RSREGTPTIG 180 GDGKNEAKSN AIVPVGEVTA TVSPNSIGTV ISPGMTTALE LRNPTTMNAK SSPTSVPCGV 240 MPSEVWLQNE RELKRERRKQ SNRESARRSR LRKQAETEEL GHKVESLTVE NATLRSEINQ 300 LTEKSEKLRL ENANLVEELK HAQLGQAKEI IMNNKDNKEG EIYEKSSNSG AKLHQLLDAS 360 PRADAVAAG

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MGNNDEGKSS KSDKSSLPVP TDQTNVHVYP DWAAMQAYYG PRVAIPPYYN SAVASGHAPP  60
PYMWGPPQPM MPPYGAPYAT IYSHGGVYAH PAVPLAAAAV ETPTKSLGNS ERGLMKKLKG  120
FDGLAMSIGN GTAENADGGA EPRPSQSAET EGSTDGSDGN TTGTDQTGRK RSREGTPTIG  180
GDGKNEAKSN AIVPVGEVTA TVSPNSIGTV ISPGMTTALE LRNPTTMNAK SSPTSVPCGV  240
MPSEVWLQNE RELKRERRKQ SNRESARRSR LRKQAETEEL GHKVESLTVE NATLRSEINQ  300
LTEKSEKLRL ENANLVEELK HAQLGQAKEI IMNNKDNKEG EIYEKSSNSG AKLHQLLDAS  360
PRADAVAAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	267	273	RRSRLRK
2	267	274	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	2e-88	bZIP family protein