PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021280531.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 215aa MW: 24956.8 Da PI: 9.885 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.5 | 5.5e-31 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien ++rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_021280531.1 10 RIENATRRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 80.7 | 3.5e-27 | 77 | 169 | 6 | 98 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ +e++++ l++e+a++ k+ie L+ + R+llGe+L+s+sl+eL qLeqqLe+s+++iR++K ++++eq+e+l++kek l en +L +k XP_021280531.1 77 RTKPSEQNMQLLKTEAANMVKKIELLEVSRRKLLGEGLGSCSLEELLQLEQQLERSVSSIRARKAQVFKEQMEQLKEKEKVLAAENARLCEKC 169 3447999*********************************************************************************99886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MVRGKTQMRR IENATRRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFAST 60 SMQETIERYN RHTKDTRTKP SEQNMQLLKT EAANMVKKIE LLEVSRRKLL GEGLGSCSLE 120 ELLQLEQQLE RSVSSIRARK AQVFKEQMEQ LKEKEKVLAA ENARLCEKCA MRPWQGSKEQ 180 RENVPYDESS PSIDVETELF IGLPERRTKC FLLQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 3e-66 | MIKC_MADS family protein |