PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021279075.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | WOX | ||||||||
Protein Properties | Length: 248aa MW: 28530.4 Da PI: 9.0958 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.9 | 4.7e-20 | 7 | 66 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql +Lee++++ r+p+a+++++++++l +++ ++V++WFqN++a++++ XP_021279075.1 7 SRWCPTPEQLMILEEMYRSgIRTPNASQIQKITSHLsfygKIEGKNVFYWFQNHKARDRQ 66 7*****************99*************************************996 PP | |||||||
2 | Wus_type_Homeobox | 120.5 | 7.2e-39 | 5 | 67 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 a++RW+PtpeQ++iLee+y+sG+rtPn+++iq+it++L+ yGkie+kNVfyWFQN+kaR+rqk XP_021279075.1 5 ASSRWCPTPEQLMILEEMYRSGIRTPNASQIQKITSHLSFYGKIEGKNVFYWFQNHKARDRQK 67 689***********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MSPAASSRWC PTPEQLMILE EMYRSGIRTP NASQIQKITS HLSFYGKIEG KNVFYWFQNH 60 KARDRQKLRR KLTKQLQLQQ QLYHQHHHHQ LQQNHPNHHF LHYFDSPGSP AFQHLSYFNS 120 ATLFPQVGVH EDAAAKQVMN YTWKFDIPER VDNMDKARMR MYGGDWLMMV DLDSPLSSPC 180 YSTATRPPLK TLELFPVTAS NLKEECNSSK HLSCISTTST TPNPTPDIPL NLPLTPSENK 240 PQALSLSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28610.1 | 7e-45 | WOX family protein |