PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021278985.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

TALE

Protein Properties

Length: 307aa MW: 34322.6 Da PI: 7.7828

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021278985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.3	7.1e-10	114	151	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + XP_021278985.1 114 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 151 664459******************************87 PP
2	BELL	61.6	1.8e-20	1	43	30	72
BELL 30 lqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +q+ +ssFe vagl++a+pY+slAlk+++r+FrcL++ai++qi XP_021278985.1 1 MQMAVSSFESVAGLNAATPYISLALKTVTRNFRCLRNAISDQI 43 9*****************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MQMAVSSFES VAGLNAATPY ISLALKTVTR NFRCLRNAIS DQIRHISRAL GEDLLSATTG 60 TSSSKGDINM SRLKYVGQKS GGVNMGFLEP QQHGWRPQRG LPERSVAILR AWLFEHFLHP 120 YPTDTDKHML ATQTGLSRNQ VSNWFINARV RVWKPMVEEI HMLESKGLAE GQNSSKNDGK 180 SGEGGPSRPN EDQSINRSCI NVLFDKQMAC ADMHVEGITG DAHEEHWNHE KRSRMDFHIP 240 TSMEGSLMGF APYQPSRLEM GGLGAVSLTL GLRHGVESSQ QQQQQYQRQE DQLRQQFGGQ 300 MIHDFAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	3e-67	TALE family protein