PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021274111.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 224aa MW: 26061.7 Da PI: 10.0722 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.6 | 4e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien++nrqvt+skRrngi+KKA+EL vLCda+v++i+fss+gk++e++s XP_021274111.1 9 KKIENTTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSSSGKFHEFIS 59 68***********************************************86 PP | |||||||
2 | K-box | 91.2 | 1.8e-30 | 71 | 168 | 1 | 98 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yqk+ g +l+++++e++q+++++Lk+ ++ L+re+R+++GedL++L++keLq Le ++ +sl+ +R++K++++++q+++ +kk ++l++++ +L XP_021274111.1 71 YQKTLGIDLWSSHYEKMQENYRRLKEINNRLRREIRQRIGEDLDDLNIKELQALEAKMASSLEAVRQRKYHVIKTQTDTYKKKVRNLEQRHANLV 165 78899999************************************************************************************997 PP K-box 96 kkl 98 l XP_021274111.1 166 LDL 168 665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MGRGKIEIKK IENTTNRQVT YSKRRNGIFK KAQELTVLCD AKVSLIMFSS SGKFHEFISP 60 NISTKTFFDL YQKTLGIDLW SSHYEKMQEN YRRLKEINNR LRREIRQRIG EDLDDLNIKE 120 LQALEAKMAS SLEAVRQRKY HVIKTQTDTY KKKVRNLEQR HANLVLDLEA KLEDGIVENE 180 AYYESAMGLA NGASNLYALR PHQNHQANLL YHGGRFGPND LRLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 1e-76 | MIKC_MADS family protein |