PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021273853.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 209aa MW: 24452.9 Da PI: 5.0867 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.7 | 3.3e-19 | 93 | 140 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 ++y+GVr+++ +g+W+AeIrdp +r r++lg+f+tae Aa+a+++a+ XP_021273853.1 93 THYRGVRQRP-WGKWAAEIRDP----IRaVRVWLGTFDTAEAAARAYDRAAVG 140 68********.**********7....358*********************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MENDNAGHPP ALTRAQEQQI MVSTLMHVIN GERPSLSVFA SSDNVFNFSD TYVPVQLNGN 60 HEYFDSIFPP SQQRHQQQQL PPRVPSNRRN NRTHYRGVRQ RPWGKWAAEI RDPIRAVRVW 120 LGTFDTAEAA ARAYDRAAVG FRGDKAKVNF PLSDYKKERE EEEEEEEKKK IPEEKDKSHE 180 EKGQTSKEND DEEWQIFSDE EFRELMMMD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 4e-23 | ERF family protein |