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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr16176.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 405aa MW: 46081.3 Da PI: 6.9191 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98 | 3.9e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gklyeyss Dr16176.1 9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLYEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 90.2 | 3.7e-30 | 88 | 174 | 14 | 100 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + + e+ kLk++ie +q++qRhl+G++L++L +k+Lq+LeqqLe+slk+iRs+K++ll ++i +lqkkek l e+nk L+++++e Dr16176.1 88 QGDWFLEYGKLKAKIEIIQKSQRHLMGDQLDTLGIKQLQHLEQQLENSLKHIRSRKSHLLSDSIADLQKKEKLLMEQNKLLENEVME 174 557888****************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLYEYSSD 60 SSMERIIERY EHYSYAEKAL SMTEPDSQGD WFLEYGKLKA KIEIIQKSQR HLMGDQLDTL 120 GIKQLQHLEQ QLENSLKHIR SRKSHLLSDS IADLQKKEKL LMEQNKLLEN EVMEKEKARA 180 MAEQTQWEQQ NQAQQTTSCS SAPSFLITTD SLPTLNIGYL QTSSSSNAHT NVRWHPYFLN 240 PSAPKEGIKK TDLYKLKYGV EKSEATSSRM KKVFQGIGLE YDPSGLTGNT VDSHRLIALA 300 AQQGYDKQNA LVEELFFNYF CEGKYVGDHQ VLLDAAEKVG IERAADVLED PSKLLEEINE 360 ELEKYPARGM GVPLFLINGE HKISGGQPPE VFLKTFQEIA ENRTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 4e-80 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr16176.1 |