PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr16065.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | WOX | ||||||||
Protein Properties | Length: 202aa MW: 22790.5 Da PI: 8.725 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.6 | 8.8e-18 | 6 | 64 | 2 | 55 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRake 55 ++R+++t+eq eLe+++++ + p+ ++++ +++ l +++ ++V++WFqN+Ra+e Dr16065.1 6 STRWCPTSEQRMELENMYRSgLHSPDVSQIQLITTYLscygKIEGKNVFYWFQNHRARE 64 58*****************99************************************97 PP | |||||||
2 | Wus_type_Homeobox | 95.4 | 4.7e-31 | 5 | 67 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++tRW+Pt+eQ + Le++y+sGl +P ++iq it+ L+ yGkie+kNVfyWFQN++aRe qk Dr16065.1 5 PSTRWCPTSEQRMELENMYRSGLHSPDVSQIQLITTYLSCYGKIEGKNVFYWFQNHRAREGQK 67 689*********************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MPQTPSTRWC PTSEQRMELE NMYRSGLHSP DVSQIQLITT YLSCYGKIEG KNVFYWFQNH 60 RAREGQKLRK RXARQLVLHN PNLNNQLIHT FEEPRLHPQQ LGGAQDADQA MNLLSKLEAE 120 EGQDGIIGTA NGIGISYGYX VHPSCRPLIA LELFPCKSSV SNSKKAKLVE PMKKIRRSLE 180 FLTSRDAELG VPPEHVPSPG CS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28610.1 | 6e-30 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr16065.1 |