PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr13861.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Protein Properties

Length: 1347aa MW: 149597 Da PI: 5.0015

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr13861.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.3	1.7e-10	530	609	1	87
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 ffkv+ ++++ l +p a++ + ++ + +ed++g +W vk+ + +++ +++GW++Fv ++ +k g+fvvF +++r Dr13861.1 530 FFKVM--IGDFSQA-LFFPPIVAKKLSA--LLNQNVDIEDSNGHRWGVKV--SLVDNHLAFEQGWQDFVLDHSIKFGEFVVFNHVDR 609 56666..5556665.7778888877743..35568*************..77777799*********************8765 PP
2	B3	41.6	2.2e-13	1266	1341	17	98
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++p +f + + + k l+l+d+ r+W v + + +++ + + +GWkeF+ an+LkegD++ ++l ++++ ++vv++ + Dr13861.1 1266 SIPYSFGKMFLLR----KVLVLQDPVMRKWPVLY--CENRRFTGFIGGWKEFAAANDLKEGDTCELHLADKENHTFVVRITK 1341 8999999877655....469************..99999999999******************998899889999865 PP

Sequence ? help Back to Top
Protein Sequence Length: 1347 aa Download sequence
MWNLEPLDAL LAVLSRAFCS PLAIFIQIQG CVICLTLAIG WCGAAYVRNR EIRRMKKDAN 60 GGNYFSFICQ DINDLEHSAQ VNLPRVSVIM PLKGFGEHNL QNWRSQITSL YGGPLEFLFV 120 VESVDDPAYH VVSGLISKFK DSVEARIIVA GISTICSQKI HNQLAGIENM HKDSKYVLFL 180 DDDVRLHPGS IGALTAEMQK NPEIFIQTGY PLDLPSGSLG SYCIYEYHMP CSMGFATGGK 240 TFFLWGGCMM MHANDFREDL YGVVSGLRDG GYSDDMTLAA IAGEHKRLIT SPPVAVFPHP 300 LASDLSFSRY WNYLRKQTFV LESYISNVNW LMNRALFSSH CYLSWGFVWP YFMALTHFLA 360 ALRSLYSDRL SRELKVSSCG LTLASCLVVC TVIELLSMWN LTKVEIQLCN MLSPEGPRVS 420 LKSYNWGLIF LAMLVDNFLY PISAIRSHFS QYINWSGVRY YLREGKISKI ERFKEDVANY 480 SDLGGKHLYE TALSLSXQQQ ACMESKKSHG KDPSSSHHHH HHDAVALLSF FKVMIGDFSQ 540 ALFFPPIVAK KLSALLNQNV DIEDSNGHRW GVKVSLVDNH LAFEQGWQDF VLDHSIKFGE 600 FVVFNHVDRL LFSAKIYAIT GCERLEFVEK SIAGKSKRKR KNEASADDLS LKKCQSVGKL 660 DKDVVDSIEE SIKKKQTTKL ASGDKSDSMM VTRSMKAGVK RKGEDEDALK TSHVCHESSK 720 RRQIDVVEPV ELLDEMVDKT CQISPSDPVN MDVDVMTMTD GDNSDNAGDS ISEGIGMSRD 780 FVTEEQMPDV KLVQVPVKVG SRDSIFMKGN ITVSSPDMIA SEANGKSCNA VETDTLVTNE 840 QSLHGSLSET DAECVRIVDP LISNSVLTRD SPQGVVAVSS INLTASEEKG NLCGAIEVDT 900 LVINEELSPH HRLSPVKCQP LLASEFDGHG SQNENVILDP LINDGVLKGE SPEENVAVSS 960 VNLIPKEAIG SSCIVQQTTD GLVMNEERDC TSYGSRNETE VNCEVDVDPL ISNTVITGDL 1020 PQGITTAECT KIQLEGGETD SSESFDDNVT EENLNTADGV YKFLGTLQGI CYIVKEDSTD 1080 KFGDGMVNPF DLCDADEADI LHKTDGTFNE DKSRHISPSV PLDKVPKNEA ELGSLGKDNI 1140 HIYRSKSVSC LQTPEFQNDA NVVEETVPQS GKMPVVSLEE NEKNLNLSSE ITAREDVKPE 1200 SLIIGKKSVE LLEETEKRSS LSPEVTVNED LKPEYMDLVK PPSSSSFIFK FSLPSNNNSW 1260 LKLSNSIPYS FGKMFLLRKV LVLQDPVMRK WPVLYCENRR FTGFIGGWKE FAAANDLKEG 1320 DTCELHLADK ENHTFVVRIT KAKNPAL

Sequence ? help Back to Top

Protein Sequence Length: 1347 aa Download sequence

MWNLEPLDAL LAVLSRAFCS PLAIFIQIQG CVICLTLAIG WCGAAYVRNR EIRRMKKDAN  60
GGNYFSFICQ DINDLEHSAQ VNLPRVSVIM PLKGFGEHNL QNWRSQITSL YGGPLEFLFV  120
VESVDDPAYH VVSGLISKFK DSVEARIIVA GISTICSQKI HNQLAGIENM HKDSKYVLFL  180
DDDVRLHPGS IGALTAEMQK NPEIFIQTGY PLDLPSGSLG SYCIYEYHMP CSMGFATGGK  240
TFFLWGGCMM MHANDFREDL YGVVSGLRDG GYSDDMTLAA IAGEHKRLIT SPPVAVFPHP  300
LASDLSFSRY WNYLRKQTFV LESYISNVNW LMNRALFSSH CYLSWGFVWP YFMALTHFLA  360
ALRSLYSDRL SRELKVSSCG LTLASCLVVC TVIELLSMWN LTKVEIQLCN MLSPEGPRVS  420
LKSYNWGLIF LAMLVDNFLY PISAIRSHFS QYINWSGVRY YLREGKISKI ERFKEDVANY  480
SDLGGKHLYE TALSLSXQQQ ACMESKKSHG KDPSSSHHHH HHDAVALLSF FKVMIGDFSQ  540
ALFFPPIVAK KLSALLNQNV DIEDSNGHRW GVKVSLVDNH LAFEQGWQDF VLDHSIKFGE  600
FVVFNHVDRL LFSAKIYAIT GCERLEFVEK SIAGKSKRKR KNEASADDLS LKKCQSVGKL  660
DKDVVDSIEE SIKKKQTTKL ASGDKSDSMM VTRSMKAGVK RKGEDEDALK TSHVCHESSK  720
RRQIDVVEPV ELLDEMVDKT CQISPSDPVN MDVDVMTMTD GDNSDNAGDS ISEGIGMSRD  780
FVTEEQMPDV KLVQVPVKVG SRDSIFMKGN ITVSSPDMIA SEANGKSCNA VETDTLVTNE  840
QSLHGSLSET DAECVRIVDP LISNSVLTRD SPQGVVAVSS INLTASEEKG NLCGAIEVDT  900
LVINEELSPH HRLSPVKCQP LLASEFDGHG SQNENVILDP LINDGVLKGE SPEENVAVSS  960
VNLIPKEAIG SSCIVQQTTD GLVMNEERDC TSYGSRNETE VNCEVDVDPL ISNTVITGDL  1020
PQGITTAECT KIQLEGGETD SSESFDDNVT EENLNTADGV YKFLGTLQGI CYIVKEDSTD  1080
KFGDGMVNPF DLCDADEADI LHKTDGTFNE DKSRHISPSV PLDKVPKNEA ELGSLGKDNI  1140
HIYRSKSVSC LQTPEFQNDA NVVEETVPQS GKMPVVSLEE NEKNLNLSSE ITAREDVKPE  1200
SLIIGKKSVE LLEETEKRSS LSPEVTVNED LKPEYMDLVK PPSSSSFIFK FSLPSNNNSW  1260
LKLSNSIPYS FGKMFLLRKV LVLQDPVMRK WPVLYCENRR FTGFIGGWKE FAAANDLKEG  1320
DTCELHLADK ENHTFVVRIT KAKNPAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	1e-10	B3 family protein

Link Out ? help Back to Top
Ensembl	Dr13861.1